Package: moveHMM 1.9
moveHMM: Animal Movement Modelling using Hidden Markov Models
Provides tools for animal movement modelling using hidden Markov models. These include processing of tracking data, fitting hidden Markov models to movement data, visualization of data and fitted model, decoding of the state process, etc. <doi:10.1111/2041-210X.12578>.
Authors:
moveHMM_1.9.tar.gz
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moveHMM.pdf |moveHMM.html✨
moveHMM/json (API)
# Install 'moveHMM' in R: |
install.packages('moveHMM', repos = c('https://benjaminhlina.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/theomichelot/movehmm/issues
- elk_data - Elk data set from Morales et al.
- example - Example dataset
- haggis_data - Wild haggis data set from Michelot et al.
Last updated 8 months agofrom:223478e7ca. Checks:OK: 1 NOTE: 8. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 05 2024 |
R-4.5-win-x86_64 | NOTE | Nov 05 2024 |
R-4.5-linux-x86_64 | NOTE | Nov 05 2024 |
R-4.4-win-x86_64 | NOTE | Nov 05 2024 |
R-4.4-mac-x86_64 | NOTE | Nov 05 2024 |
R-4.4-mac-aarch64 | NOTE | Nov 05 2024 |
R-4.3-win-x86_64 | NOTE | Nov 05 2024 |
R-4.3-mac-x86_64 | NOTE | Nov 05 2024 |
R-4.3-mac-aarch64 | NOTE | Nov 05 2024 |
Exports:CIfitHMMgetPlotDatanLogLikeplotPRplotSatplotStatesplotStationarypredictStationarypredictTPMprepDatapseudoRessimDatasplitAtGapsstateProbsstationaryviterbi
Dependencies:askpassbitopsbootCircStatsclicolorspacecpp11curldigestdplyrfansifarvergenericsgeosphereggmapggplot2gluegtablehttrisobandjpegjsonlitelabelinglatticelifecyclemagrittrMASSMatrixmgcvmimemunsellnlmenumDerivopensslpillarpkgconfigplyrpngpurrrR6RColorBrewerRcppRcppArmadillorlangscalesspstringistringrsystibbletidyrtidyselectutf8vctrsviridisLitewithr
Choosing starting values in moveHMM
Rendered frommoveHMM-starting-values.Rnw
usingknitr::knitr
on Nov 05 2024.Last update: 2023-05-06
Started: 2019-05-18
Custom plots with moveHMM
Rendered frommoveHMM-custom-plots.Rnw
usingknitr::knitr
on Nov 05 2024.Last update: 2019-05-18
Started: 2019-05-02
Guide to using moveHMM
Rendered frommoveHMM-guide.Rnw
usingknitr::knitr
on Nov 05 2024.Last update: 2022-05-06
Started: 2015-11-09
moveHMM workflow: wild haggis analysis
Rendered frommoveHMM-example.Rmd
usingknitr::rmarkdown
on Nov 05 2024.Last update: 2022-05-13
Started: 2022-05-10