{ "_id": "6a1e8b0d1d7bb097a0a6871f", "Package": "miscYAPS", "Title": "Miscellaneous data and helper functions for using YAPS", "Version": "0.0.0.9000", "Authors@R": "person(\"Robert\", \"Lennox\", , \"lennox@dal.ca\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-1010-0577\"))", "Description": "Provides a bit of data and helper functions for wrapping\naround the key YAPS functions. The main function is swim_yaps,\nwhich will allow you to pass a data.table that is formatted\nwith columns ts, epo, frac, tag, serial to the function. You\nmust have a synchronisation model already available that is\nnamed sync_model and a data.table object for the hydrophones\nand their locations named hydros, as per the YAPS\nspecifications. You should be familiar with YAPS in order to\nuse this package but it will hopefully help make your life\neasier by looping through YAPS runs N (user specified number)\nof times and taking the best fit among those runs for each fish\nday. You will also find some data in the package to help you\ntry.", "License": "CC0", "Config/testthat/edition": "3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.2.3", "Remotes": [ "baktoft/yaps" ], "LazyData": "true", "Config/pak/sysreqs": "cmake libicu-dev", "Repository": "https://benjaminhlina.r-universe.dev", "Date/Publication": "2024-01-11 19:20:16 UTC", "RemoteUrl": "https://github.com/robertlennox/miscYAPS", "RemoteRef": "HEAD", "RemoteSha": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-02 07:45:10 UTC", "User": "root" }, "Author": "Robert Lennox [aut, cre] (ORCID:\n)", "Maintainer": "Robert Lennox ", "MD5sum": "6c36a3559f2f39987598d3831ec7d180", "_user": "benjaminhlina", "_type": "src", "_file": "miscYAPS_0.0.0.9000.tar.gz", "_fileid": "07c74bd73ef127bbf72d1f41c4c32d05985553b66c458425d61a6a4ff6bc3144", "_filesize": 36157116, "_sha256": "07c74bd73ef127bbf72d1f41c4c32d05985553b66c458425d61a6a4ff6bc3144", "_created": "2026-06-02T07:45:10.000Z", "_published": "2026-06-02T07:49:33.863Z", "_distro": "noble", "_jobs": [ { "job": 79023431873, "time": 181, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "WARNING", "artifact": "7351899489" }, { "job": 79023431877, "time": 176, "config": "linux-release-x86_64", "r": "4.6.0", "check": "WARNING", "artifact": "7351897534" }, { "job": 79023431883, "time": 125, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "WARNING", "artifact": "7351881578" }, { "job": 79023431951, "time": 136, "config": "macos-release-arm64", "r": "4.6.0", "check": "WARNING", "artifact": "7351885113" }, { "job": 79022805774, "time": 244, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7351838377" }, { "job": 79023431858, "time": 184, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7351900401" }, { "job": 79023431886, "time": 122, "config": "windows-devel", "r": "4.7.0", "check": "WARNING", "artifact": "7351880476" }, { "job": 79023431878, "time": 126, "config": "windows-oldrel", "r": "4.5.3", "check": "WARNING", "artifact": "7351881758" }, { "job": 79023431922, "time": 120, "config": "windows-release", "r": "4.6.0", "check": "WARNING", "artifact": "7351879743" } ], "_buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/robertlennox/miscYAPS", "_commit": { "id": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "author": "robertlennox <42450990+robertlennox@users.noreply.github.com>", "committer": "GitHub ", "message": "Merge pull request #3 from mhpob/patch-1\n\nUpdate DESCRIPTION to include gridExtra", "time": 1705000816 }, "_maintainer": { "name": "Robert Lennox", "email": "lennox@dal.ca", "orcid": "0000-0003-1010-0577" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 2.10", "role": "Depends" }, { "package": "beepr", "role": "Imports" }, { "package": "cli", "version": ">= 3.6.0", "role": "Imports" }, { "package": "glue", "version": ">= 1.6.2", "role": "Imports" }, { "package": "lifecycle", "version": ">= 1.0.3", "role": "Imports" }, { "package": "rlang", "version": ">= 1.0.6", "role": "Imports" }, { "package": "withr", "version": ">= 2.5.0", "role": "Imports" }, { "package": "purrr", "role": "Imports" }, { "package": "yaps", "role": "Imports" }, { "package": "dplyr", "role": "Imports" }, { "package": "tidyr", "role": "Imports" }, { "package": "lubridate", "role": "Imports" }, { "package": "data.table", "role": "Imports" }, { "package": "magrittr", "role": "Imports" }, { "package": "gridExtra", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "robertlennox", "_selfowned": false, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 2, "_contributors": [ { "user": "robertlennox", "count": 45, "uuid": 42450990 }, { "user": "jdpye", "count": 2, "uuid": 3063276 }, { "user": "mhpob", "count": 1, "uuid": 8228205 } ], "_userbio": { "uuid": 29612410, "type": "user", "name": "Benjamin Hlina", "description": "Postdoctoral Researcher @ GLIER - University of Windsor - Studying food webs and spatial ecology of fishes in Lakes Ontario and Huron." }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/miscYAPS" }, "_devurl": "https://github.com/robertlennox/miscyaps", "_searchresults": 1, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/miscYAPS.html", "manual.pdf" ], "_cranurl": false, "_exports": [ "errorplot", "swim_yaps", "sync", "synccoverage", "syncgrid", "transmits", "yaps_all" ], "_datasets": [ { "name": "aur", "title": "", "object": "aur", "class": [ "data.table", "data.frame" ], "fields": [ "dt", "epo", "frac", "oid", "serial", "sync", "lon", "lat", "temperature" ], "rows": 2305399, "table": true, "tojson": true }, { "name": "boats", "title": "", "object": "boats", "class": [ "list" ], "fields": [], "table": false, "tojson": true }, { "name": "dets", "title": "", "object": "dets", "class": [ "data.table", "data.frame" ], "fields": [ "dt", "epo", "frac", "oid", "serial", "sync", "lon", "lat", "temperature" ], "rows": 2305399, "table": true, "tojson": true } ], "_help": [ { "page": "swim_yaps", "title": "functions to get receiver and tagging metadata into session", "topics": [ "swim_yaps" ] }, { "page": "sync", "title": "functions to get receiver and tagging metadata into session", "topics": [ "sync" ] }, { "page": "yaps_all", "title": "functions to get receiver and tagging metadata into session", "topics": [ "yaps_all" ] } ], "_rundeps": [ "audio", "beepr", "boot", "circular", "cli", "cowplot", "cpp11", "data.table", "dplyr", "farver", "generics", "ggplot2", "ggrepel", "glue", "gridExtra", "gtable", "isoband", "labeling", "lattice", "lifecycle", "lubridate", "magrittr", "Matrix", "mvtnorm", "nloptr", "pillar", "pkgconfig", "plyr", "purrr", "R6", "RColorBrewer", "Rcpp", "RcppEigen", "reshape2", "rlang", "S7", "scales", "stringi", "stringr", "tibble", "tictoc", "tidyr", "tidyselect", "timechange", "TMB", "utf8", "vctrs", "viridis", "viridisLite", "withr", "yaps", "zoo" ], "_score": 1.6020599913279625, "_indexed": false, "_nocasepkg": "miscyaps", "_universes": [ "benjaminhlina" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.0.0.9000", "date": "2026-06-02T07:48:08.000Z", "distro": "noble", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "c9c2641d111a0db7e68c97b140811923fa0e4902e71780cf1a8fbb942f10bbb7", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.6.0", "os": "linux", "version": "0.0.0.9000", "date": "2026-06-02T07:48:10.000Z", "distro": "noble", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "e8519fa90a51fdcd334a31573e4e4cc6a8f6873d71b54e42171539b8104d0fab", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.5.3", "os": "mac", "version": "0.0.0.9000", "date": "2026-06-02T07:47:38.000Z", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "79dce1f41559470204aa656668c3e02c80d34c0e483b77116c81c9af683088e4", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.6.0", "os": "mac", "version": "0.0.0.9000", "date": "2026-06-02T07:47:40.000Z", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "783f8b517fd311ccd05e721b57bc98c2e6ffbe30876ed6239df8e84438ae8c00", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.6.0", "os": "wasm", "version": "0.0.0.9000", "date": "2026-06-02T07:48:59.000Z", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "1476d9990601be7973825228bdece8cc9d58ad34a3d3fa65d56ac9597dd0baac", "status": "success", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.7.0", "os": "win", "version": "0.0.0.9000", "date": "2026-06-02T07:47:11.000Z", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "59bf30a9335958ee337b72b6bd9cdc0cf942c58d3f710fbdef125a9b1e15eacf", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.5.3", "os": "win", "version": "0.0.0.9000", "date": "2026-06-02T07:47:14.000Z", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "0bd3a84b6e9f1d2b67c7df0b4b4f922aa9894dead6953e5a939e934570076390", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" }, { "r": "4.6.0", "os": "win", "version": "0.0.0.9000", "date": "2026-06-02T07:47:18.000Z", "commit": "a9b579d334db8fe77242371a85af17b7f31ff1b1", "fileid": "5fe86a2db6de873bfb9b4a511642caf6174e97ba60f4528ad36316fe6fce9842", "status": "success", "check": "WARNING", "buildurl": "https://github.com/r-universe/benjaminhlina/actions/runs/26805765951" } ] }